Index of /public/2026Q2/HG002-SPRQ-Nx/Use3/analysis

Icon  Name                                                        Last modified      Size  Description
[PARENTDIR] Parent Directory                                                                 -   
[   ] HG002.GRCh38.haplotagged.bam                                2026-06-12 11:20   55G  
[   ] HG002.GRCh38.trgt.spanning.sorted.bam                       2026-06-12 12:17  3.2G  
[   ] HG002.GRCh38.cpg_pileup.combined.bw                         2026-06-12 11:43  838M  
[   ] HG002.GRCh38.cpg_pileup.hap1.bw                             2026-06-12 11:43  758M  
[   ] HG002.GRCh38.cpg_pileup.hap2.bw                             2026-06-12 11:43  758M  
[   ] HG002.GRCh38.small_variants.g.vcf.gz                        2026-06-12 10:07  465M  
[   ] HG002.GRCh38.cpg_pileup.combined.bed.gz                     2026-06-12 11:42  328M  
[   ] HG002.GRCh38.cpg_pileup.hap1.bed.gz                         2026-06-12 11:42  270M  
[   ] HG002.GRCh38.cpg_pileup.hap2.bed.gz                         2026-06-12 11:42  269M  
[   ] HG002.paraphase.bam                                         2026-06-12 08:56  247M  
[   ] HG002.GRCh38.structural_variants.maf.bw                     2026-06-12 10:46  178M  
[   ] HG002.GRCh38.small_variants.phased.vcf.gz                   2026-06-12 11:20  143M  
[   ] HG002.GRCh38.trgt.sorted.vcf.gz                             2026-06-12 12:15  115M  
[   ] HG002.GRCh38.bam_statistics.tsv.gz                          2026-06-12 11:59  105M  
[   ] HG002.GRCh38.hiphase.haplotags.tsv.gz                       2026-06-12 11:20   37M  
[   ] HG002.GRCh38.bcftools_roh.out.gz                            2026-06-12 11:29   34M  
[   ] HG002.GRCh38.mosdepth.regions.bed.gz                        2026-06-12 08:41   33M  
[   ] HG002.GRCh38.haplotagged.bam.bai                            2026-06-12 11:26   16M  
[   ] HG002.GRCh38.structural_variants.gc_bias_corrected_depth.bw 2026-06-12 10:46   14M  
[   ] HG002.GRCh38.structural_variants.depth.bw                   2026-06-12 10:46   12M  
[   ] HG002.paraphase.json                                        2026-06-12 08:56   12M  
[TXT] HG002.GRCh38.methbat.profile.tsv                            2026-06-12 11:45  5.1M  
[   ] HG002.GRCh38.structural_variants.phased.vcf.gz              2026-06-12 11:20  4.7M  
[   ] HG002.GRCh38.structural_variants.supporting_reads.json.gz   2026-06-12 10:51  4.2M  
[   ] HG002.GRCh38.trgt.spanning.sorted.bam.bai                   2026-06-12 12:17  4.1M  
[TXT] HG002.GRCh38.trgt.dropouts.txt                              2026-06-12 12:21  3.4M  
[   ] HG002.GRCh38.cpg_pileup.combined.bed.gz.tbi                 2026-06-12 11:43  1.6M  
[   ] HG002.GRCh38.small_variants.phased.vcf.gz.tbi               2026-06-12 11:20  1.6M  
[   ] HG002.GRCh38.cpg_pileup.hap2.bed.gz.tbi                     2026-06-12 11:42  1.5M  
[   ] HG002.GRCh38.cpg_pileup.hap1.bed.gz.tbi                     2026-06-12 11:42  1.5M  
[   ] HG002.GRCh38.trgt.sorted.vcf.gz.tbi                         2026-06-12 12:15  1.3M  
[   ] HG002.pharmcat.report.json                                  2026-06-12 11:36  1.0M  
[   ] HG002.paraphase.bam.bai                                     2026-06-12 08:56  941K  
[TXT] HG002.pharmcat.report.html                                  2026-06-12 11:36  739K  
[   ] HG002.GRCh38.small_variants.g.vcf.gz.tbi                    2026-06-12 10:08  633K  
[   ] HG002.paraphase_vcfs.tar.gz                                 2026-06-12 08:56  368K  
[TXT] HG002.GRCh38.hiphase.blocks.tsv                             2026-06-12 11:26  358K  
[   ] HG002.pbstarphase.json                                      2026-06-12 11:31  335K  
[   ] HG002.pharmcat.match.json                                   2026-06-12 11:36  308K  
[   ] HG002.GRCh38.structural_variants.phased.vcf.gz.tbi          2026-06-12 11:20  245K  
[   ] HG002.pharmcat.phenotype.json                               2026-06-12 11:36  159K  
[TXT] HG002.GRCh38.small_variants.vcf.stats.txt                   2026-06-12 11:28   46K  
[IMG] HG002.GRCh38.small_variants.snv_distribution.png            2026-06-12 11:28   43K  
[   ] HG002.GRCh38.bcftools_roh.bed                               2026-06-12 11:29   39K  
[IMG] HG002.GRCh38.mosdepth.depth_distribution.png                2026-06-12 08:41   38K  
[IMG] HG002.GRCh38.mg_distribution.png                            2026-06-12 12:00   38K  
[IMG] HG002.read_quality_histogram.png                            2026-06-12 12:00   34K  
[IMG] HG002.GRCh38.mapq_distribution.png                          2026-06-12 12:00   32K  
[IMG] HG002.read_length_histogram.png                             2026-06-12 11:59   32K  
[IMG] HG002.GRCh38.small_variants.indel_distribution.png          2026-06-12 11:29   30K  
[   ] HG002.GRCh38.structural_variants.copynum.summary.json       2026-06-12 10:51   19K  
[TXT] HG002.GRCh38.mosdepth.summary.txt                           2026-06-12 08:41   15K  
[TXT] HG002.GRCh38.hiphase.stats.tsv                              2026-06-12 11:26   15K  
[   ] outputs.json                                                2026-06-12 12:21   13K  
[   ] HG002.GRCh38.structural_variants.copynum.bedgraph           2026-06-12 10:51   10K  
[   ] HG002.GRCh38.mosdepth.regions.bed.gz.csi                    2026-06-12 08:41  9.0K  
[TXT] HG002.stats.txt                                             2026-06-12 12:21  765   
[   ] inputs.json                                                 2026-06-12 07:27  688   
[   ] HG002.GRCh38.mitorsaw.vcf.gz                                2026-06-12 08:39  631   
[   ] HG002.GRCh38.mitorsaw.json                                  2026-06-12 08:39  422   
[   ] HG002.GRCh38.mitorsaw.vcf.gz.tbi                            2026-06-12 08:39  119   
[TXT] HG002.messages.txt                                          2026-06-12 12:21   84