Index of /public/2024Q4/Vega/HG002/Human-WGS-variant-pipeline/HiFi-human-WGS-WDL_v2.0.0-rc4

Icon  Name                                                                                   Last modified      Size  Description
[PARENTDIR] Parent Directory                                                                                            -   
[   ] m21009_241011_231051.GRCh38.haplotagged.bam                                            2024-10-28 21:56   28G  
[   ] m21009_241011_231051.GRCh38.small_variants.g.vcf.gz                                    2024-10-16 11:59  1.3G  
[   ] m21009_241011_231051.GRCh38.combined.bed                                               2024-10-16 13:25  1.2G  
[   ] m21009_241011_231051.GRCh38.combined.bw                                                2024-10-16 13:26  782M  
[   ] m21009_241011_231051.GRCh38.hap1.bed                                                   2024-10-16 13:25  603M  
[   ] m21009_241011_231051.GRCh38.hap2.bed                                                   2024-10-16 13:25  602M  
[   ] m21009_241011_231051.GRCh38.hap1.bw                                                    2024-10-16 13:25  407M  
[   ] m21009_241011_231051.GRCh38.hap2.bw                                                    2024-10-16 13:25  406M  
[TXT] m21009_241011_231051.GRCh38.bcftools_roh.out                                           2024-10-16 13:08  345M  
[   ] m21009_241011_231051.GRCh38.trgt.spanning.sorted.bam                                   2024-10-28 22:03  284M  
[   ] m21009_241011_231051.GRCh38.hificnv.maf.bw                                             2024-10-16 12:06  147M  
[   ] m21009_241011_231051.GRCh38.small_variants.phased.vcf.gz                               2024-10-30 22:57  126M  
[   ] m21009_241011_231051.paraphase.bam                                                     2024-10-28 22:03  125M  
[   ] m21009_241011_231051.GRCh38.regions.bed.gz                                             2024-10-15 22:10   32M  
[   ] m21009_241011_231051.read_length_and_quality.tsv.gz                                    2024-10-15 22:03   31M  
[   ] m21009_241011_231051.GRCh38.hiphase.haplotags.tsv.gz                                   2024-10-16 12:57   18M  
[   ] m21009_241011_231051.GRCh38.trgt.sorted.phased.vcf.gz                                  2024-10-30 22:57  6.7M  
[   ] m21009_241011_231051.GRCh38.hificnv.depth.bw                                           2024-10-16 12:05  6.3M  
[   ] m21009_241011_231051.GRCh38.haplotagged.bam.bai                                        2024-10-28 22:03  6.1M  
[   ] m21009_241011_231051.paraphase.json                                                    2024-10-15 22:29  6.1M  
[   ] m21009_241011_231051.GRCh38.structural_variants.phased.vcf.gz                          2024-10-30 22:57  4.3M  
[   ] m21009_241011_231051.GRCh38.trgt.spanning.sorted.bam.bai                               2024-10-28 22:03  3.7M  
[   ] m21009_241011_231051.GRCh38.small_variants.phased.vcf.gz.tbi                           2024-10-30 22:57  1.6M  
[   ] m21009_241011_231051.GRCh38.small_variants.phased.preprocessed.filtered.report.json    2024-10-16 13:14  1.0M  
[   ] m21009_241011_231051.GRCh38.small_variants.g.vcf.gz.tbi                                2024-10-16 12:01  1.0M  
[   ] m21009_241011_231051.GRCh38.trgt.sorted.phased.vcf.gz.tbi                              2024-10-30 22:57  948K  
[   ] m21009_241011_231051.paraphase.bam.bai                                                 2024-10-28 22:03  895K  
[TXT] m21009_241011_231051.GRCh38.small_variants.phased.preprocessed.filtered.report.html    2024-10-16 13:14  768K  
[TXT] m21009_241011_231051.GRCh38.hiphase.blocks.tsv                                         2024-10-16 13:06  535K  
[   ] m21009_241011_231051.GRCh38.structural_variants.phased.vcf.gz.tbi                      2024-10-30 22:57  362K  
[   ] m21009_241011_231051.GRCh38.small_variants.phased.preprocessed.filtered.match.json     2024-10-16 13:14  322K  
[   ] m21009_241011_231051.paraphase_vcfs.tar.gz                                             2024-10-30 15:28  319K  
[   ] m21009_241011_231051.GRCh38.roh.bed                                                    2024-10-16 13:08  278K  
[   ] m21009_241011_231051.GRCh38.small_variants.phased.preprocessed.filtered.phenotype.json 2024-10-16 13:14  168K  
[TXT] m21009_241011_231051.GRCh38.small_variants.phased.missing_pgx_var.vcf                  2024-10-16 13:09   57K  
[TXT] m21009_241011_231051.GRCh38.small_variants.phased.preprocessed.filtered.vcf            2024-10-30 15:28   57K  
[TXT] m21009_241011_231051.GRCh38.small_variants.vcf.stats.txt                               2024-10-16 13:08   48K  
[   ] m21009_241011_231051.pbstarphase.json                                                  2024-10-16 13:08   31K  
[IMG] m21009_241011_231051.read_quality_histogram.png                                        2024-10-15 22:03   21K  
[IMG] m21009_241011_231051.read_length_histogram.png                                         2024-10-15 22:03   20K  
[TXT] m21009_241011_231051.GRCh38.hiphase.stats.tsv                                          2024-10-16 13:06   17K  
[TXT] m21009_241011_231051.GRCh38.mosdepth.summary.txt                                       2024-10-15 22:10   14K  
[   ] m21009_241011_231051.GRCh38.regions.bed.gz.csi                                         2024-10-15 22:10  9.0K  
[   ] m21009_241011_231051.GRCh38.hificnv.copynum.bedgraph                                   2024-10-16 12:06  6.5K  
[TXT] m21009_241011_231051.GRCh38.trgt.dropouts.txt                                          2024-10-15 22:25  6.2K  
[   ] m21009_241011_231051.GRCh38.hificnv.vcf.gz                                             2024-10-16 12:06  3.2K  
[   ] m21009_241011_231051.GRCh38.hificnv.vcf.gz.tbi                                         2024-10-16 12:06  2.6K  
[TXT] m21009_241011_231051.read_quality_histogram.tsv                                        2024-10-15 22:03  931   
[TXT] m21009_241011_231051.read_length_histogram.tsv                                         2024-10-15 22:03  878