Index of /public/revio/2024Q4/RevioLayout

 Name                    Last modified      Size  Description
 Parent Directory                             -   
 1_A01/                  2025-11-04 08:58    -   
 README.txt              2025-11-04 09:01  3.9K  

OVERVIEW
    This directory includes a full Revio run directory from instrument control software 13.3.
    The sample is an HG002 WGS library.


LAYOUT
    1_A01/
    ├── fail_reads
    │   ├── m84039_241001_220042_s2.fail_reads.bc2018.bam
    │   ├── m84039_241001_220042_s2.fail_reads.bc2018.bam.pbi
    │   ├── m84039_241001_220042_s2.fail_reads.unassigned.bam
    │   └── m84039_241001_220042_s2.fail_reads.unassigned.bam.pbi
    ├── hifi_reads
    │   ├── m84039_241001_220042_s2.hifi_reads.bc2018.bam
    │   ├── m84039_241001_220042_s2.hifi_reads.bc2018.bam.pbi
    │   ├── m84039_241001_220042_s2.hifi_reads.unassigned.bam
    │   └── m84039_241001_220042_s2.hifi_reads.unassigned.bam.pbi
    ├── metadata
    │   ├── Transfer_Test_241001_215321.txt
    │   ├── m84039_241001_220042_s2.barcodes.fasta
    │   ├── m84039_241001_220042_s2.basecaller.log
    │   ├── m84039_241001_220042_s2.baz2bam.log
    │   ├── m84039_241001_220042_s2.ccs.log
    │   ├── m84039_241001_220042_s2.fail_reads.jasmine.log
    │   ├── m84039_241001_220042_s2.fail_reads.lima.log
    │   ├── m84039_241001_220042_s2.fail_reads.samtools.log
    │   ├── m84039_241001_220042_s2.fail_reads.trim.log
    │   ├── m84039_241001_220042_s2.finalize-dataset.log
    │   ├── m84039_241001_220042_s2.hifi_reads.jasmine.log
    │   ├── m84039_241001_220042_s2.hifi_reads.lima.log
    │   ├── m84039_241001_220042_s2.hifi_reads.samtools.log
    │   ├── m84039_241001_220042_s2.hifi_reads.trim.log
    │   ├── m84039_241001_220042_s2.metadata.xml
    │   ├── m84039_241001_220042_s2.sequencing_control.subreads.bam
    │   ├── m84039_241001_220042_s2.sequencing_control.subreads.bam.pbi
    │   ├── m84039_241001_220042_s2.sts.xml
    │   ├── m84039_241001_220042_s2.transferdone
    │   ├── m84039_241001_220042_s2_basic_preview_4hr.baz2bam.log
    │   ├── m84039_241001_220042_s2_basic_preview_4hr.metadata.xml
    │   ├── m84039_241001_220042_s2_full_preview_23hr.baz2bam.log
    │   └── m84039_241001_220042_s2_full_preview_23hr.metadata.xml
    ├── pb_formats
    │   ├── m84039_241001_220042_s2.hifi_reads.bc2018.consensusreadset.xml
    │   ├── m84039_241001_220042_s2.hifi_reads.consensusreadset.xml
    │   ├── m84039_241001_220042_s2.hifi_reads.json
    │   └── m84039_241001_220042_s2.hifi_reads.unassigned.consensusreadset.xml
    └── statistics
        ├── m84039_241001_220042_s2.ccs_report.json
        ├── m84039_241001_220042_s2.ccs_report.txt
        ├── m84039_241001_220042_s2.fail_reads.5mc_report.json
        ├── m84039_241001_220042_s2.fail_reads.6ma_report.json
        ├── m84039_241001_220042_s2.fail_reads.lima_counts.txt
        ├── m84039_241001_220042_s2.fail_reads.lima_report.txt
        ├── m84039_241001_220042_s2.fail_reads.lima_summary.txt
        ├── m84039_241001_220042_s2.fail_reads.unassigned.json
        ├── m84039_241001_220042_s2.hifi_reads.5mc_report.json
        ├── m84039_241001_220042_s2.hifi_reads.6ma_report.json
        ├── m84039_241001_220042_s2.hifi_reads.lima_counts.txt
        ├── m84039_241001_220042_s2.hifi_reads.lima_report.txt
        ├── m84039_241001_220042_s2.hifi_reads.lima_summary.txt
        ├── m84039_241001_220042_s2.hifi_reads.unassigned.json
        ├── m84039_241001_220042_s2.pbreports.log
        ├── m84039_241001_220042_s2.report.pdf
        ├── m84039_241001_220042_s2.reports.zip
        ├── m84039_241001_220042_s2.summary.json
        ├── m84039_241001_220042_s2.zmw_metrics.csv.gz
        └── m84039_241001_220042_s2.zmw_metrics.json.gz