>|> 20201023 00:59:56.013 -|- INFO -|- LaaRunner -|- 0x2ac571275c00|| -|- Welcome to pbaa.

>|> 20201023 00:59:56.111 -|- INFO -|- GraphProcessing -|- 0x2ac571275c00|| -|- 43 sequence entries.
>|> 20201023 00:59:56.111 -|- INFO -|- GraphProcessing -|- 0x2ac571275c00|| -|- 234136 nodes before filtering.
>|> 20201023 00:59:56.169 -|- INFO -|- GraphProcessing -|- 0x2ac571275c00|| -|- 131707 nodes after filtering.

>|> 20201023 00:59:56.169 -|- INFO -|- GetGuideInfo -|- 0x2ac571275c00|| -|- Processing 43 guide loci.
>|> 20201023 00:59:56.247 -|- INFO -|- GetGuideInfo -|- 0x2ac571275c00|| -|- There are 131707 unique kmers within guide sequence(s).

>|> 20201023 01:00:00.257 -|- INFO -|- ClusterReads -|- 0x2ac571275c00|| -|- Clustered sample: ../fastq_600/demultiplex.C1-218.fastq locus: HLA-A nreads: 101 nvariants before filter: 18 nvariants after filter: 18 nclusters: 10

>|> 20201023 01:00:02.857 -|- INFO -|- ClusterReads -|- 0x2ac571275c00|| -|- Clustered sample: ../fastq_600/demultiplex.C1-218.fastq locus: HLA-B nreads: 59 nvariants before filter: 22 nvariants after filter: 22 nclusters: 9

>|> 20201023 01:00:05.221 -|- INFO -|- ClusterReads -|- 0x2ac571275c00|| -|- Clustered sample: ../fastq_600/demultiplex.C1-218.fastq locus: HLA-C nreads: 106 nvariants before filter: 11 nvariants after filter: 11 nclusters: 10

>|> 20201023 01:00:07.894 -|- INFO -|- ClusterReads -|- 0x2ac571275c00|| -|- Clustered sample: ../fastq_600/demultiplex.C1-218.fastq locus: HLA-DPB1 nreads: 31 nvariants before filter: 44 nvariants after filter: 44 nclusters: 6

>|> 20201023 01:00:15.645 -|- INFO -|- ClusterReads -|- 0x2ac571275c00|| -|- Clustered sample: ../fastq_600/demultiplex.C1-218.fastq locus: HLA-DQB1 nreads: 206 nvariants before filter: 19 nvariants after filter: 19 nclusters: 10

>|> 20201023 01:00:17.814 -|- INFO -|- ClusterReads -|- 0x2ac571275c00|| -|- Clustered sample: ../fastq_600/demultiplex.C1-218.fastq locus: HLA-DRB1 nreads: 97 nvariants before filter: 11 nvariants after filter: 11 nclusters: 4

>|> 20201023 01:00:17.817 -|- INFO -|- LaaRunner -|- 0x2ac571275c00|| -|- Generating consensus sequences for clusters.
>|> 20201023 01:00:18.793 -|- WARN -|- operator() -|- 0x2ac573171700|| -|- read: m64012_200712_164638/157484043/ccs rounded length: 2500 skipped > 100 bp. from best length.
>|> 20201023 01:00:18.793 -|- WARN -|- operator() -|- 0x2ac573171700|| -|- read: m64012_200712_164638/161220101/ccs rounded length: 1900 skipped > 100 bp. from best length.
>|> 20201023 01:00:18.906 -|- WARN -|- operator() -|- 0x2ac573171700|| -|- read: m64012_200712_164638/122030206/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:20.587 -|- WARN -|- operator() -|- 0x2ac57276c700|| -|- read: m64012_200712_164638/118882576/ccs rounded length: 1700 skipped > 100 bp. from best length.
>|> 20201023 01:00:22.800 -|- WARN -|- operator() -|- 0x2ac573573700|| -|- read: m64012_200712_164638/35324083/ccs rounded length: 3200 skipped > 100 bp. from best length.
>|> 20201023 01:00:24.747 -|- WARN -|- operator() -|- 0x2ac573171700|| -|- read: m64012_200712_164638/165939815/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:30.987 -|- WARN -|- operator() -|- 0x2ac572f70700|| -|- read: m64012_200712_164638/118554964/ccs rounded length: 2500 skipped > 100 bp. from best length.
>|> 20201023 01:00:31.072 -|- WARN -|- operator() -|- 0x2ac572f70700|| -|- read: m64012_200712_164638/166396420/ccs rounded length: 3400 skipped > 100 bp. from best length.
>|> 20201023 01:00:31.236 -|- WARN -|- operator() -|- 0x2ac57276c700|| -|- read: m64012_200712_164638/59902318/ccs rounded length: 3000 skipped > 100 bp. from best length.
>|> 20201023 01:00:33.278 -|- WARN -|- operator() -|- 0x2ac572b6e700|| -|- read: m64012_200712_164638/11340583/ccs rounded length: 2900 skipped > 100 bp. from best length.
>|> 20201023 01:00:44.612 -|- WARN -|- operator() -|- 0x2ac572f70700|| -|- read: m64012_200712_164638/26085298/ccs rounded length: 2800 skipped > 100 bp. from best length.
>|> 20201023 01:01:00.936 -|- WARN -|- operator() -|- 0x2ac573372700|| -|- read: m64012_200712_164638/174719942/ccs rounded length: 3300 skipped > 100 bp. from best length.
>|> 20201023 01:01:03.431 -|- WARN -|- operator() -|- 0x2ac573372700|| -|- read: m64012_200712_164638/179896612/ccs rounded length: 3900 skipped > 100 bp. from best length.
>|> 20201023 01:01:33.987 -|- INFO -|- LaaRunner -|- 0x2ac571275c00|| -|- pbaa finished without error. Goodbye.