>|> 20201023 00:59:56.033 -|- INFO -|- LaaRunner -|- 0x2b09e3206c00|| -|- Welcome to pbaa.

>|> 20201023 00:59:56.213 -|- INFO -|- GraphProcessing -|- 0x2b09e3206c00|| -|- 43 sequence entries.
>|> 20201023 00:59:56.213 -|- INFO -|- GraphProcessing -|- 0x2b09e3206c00|| -|- 234136 nodes before filtering.
>|> 20201023 00:59:56.337 -|- INFO -|- GraphProcessing -|- 0x2b09e3206c00|| -|- 131707 nodes after filtering.

>|> 20201023 00:59:56.337 -|- INFO -|- GetGuideInfo -|- 0x2b09e3206c00|| -|- Processing 43 guide loci.
>|> 20201023 00:59:56.489 -|- INFO -|- GetGuideInfo -|- 0x2b09e3206c00|| -|- There are 131707 unique kmers within guide sequence(s).

>|> 20201023 00:59:56.854 -|- WARN -|- operator() -|- 0x2b09e3206c00|| -|- m64012_200712_164638/79365437/ccs has no guide hits, skipping read.
>|> 20201023 00:59:59.926 -|- INFO -|- ClusterReads -|- 0x2b09e3206c00|| -|- Clustered sample: ../fastq_600/demultiplex.24695-HG007.fastq locus: HLA-A nreads: 61 nvariants before filter: 19 nvariants after filter: 19 nclusters: 10

>|> 20201023 01:00:01.182 -|- INFO -|- ClusterReads -|- 0x2b09e3206c00|| -|- Clustered sample: ../fastq_600/demultiplex.24695-HG007.fastq locus: HLA-B nreads: 33 nvariants before filter: 19 nvariants after filter: 19 nclusters: 8

>|> 20201023 01:00:02.938 -|- INFO -|- ClusterReads -|- 0x2b09e3206c00|| -|- Clustered sample: ../fastq_600/demultiplex.24695-HG007.fastq locus: HLA-C nreads: 62 nvariants before filter: 14 nvariants after filter: 14 nclusters: 10

>|> 20201023 01:00:03.073 -|- INFO -|- ClusterReads -|- 0x2b09e3206c00|| -|- Clustered sample: ../fastq_600/demultiplex.24695-HG007.fastq locus: HLA-DPB1 nreads: 98 nvariants before filter: 0 nvariants after filter: 0 nclusters: 8

>|> 20201023 01:00:03.199 -|- INFO -|- ClusterReads -|- 0x2b09e3206c00|| -|- Clustered sample: ../fastq_600/demultiplex.24695-HG007.fastq locus: HLA-DQB1 nreads: 143 nvariants before filter: 0 nvariants after filter: 0 nclusters: 7

>|> 20201023 01:00:04.165 -|- INFO -|- ClusterReads -|- 0x2b09e3206c00|| -|- Clustered sample: ../fastq_600/demultiplex.24695-HG007.fastq locus: HLA-DRB1 nreads: 202 nvariants before filter: 2 nvariants after filter: 2 nclusters: 3

>|> 20201023 01:00:04.167 -|- INFO -|- LaaRunner -|- 0x2b09e3206c00|| -|- Generating consensus sequences for clusters.
>|> 20201023 01:00:04.173 -|- WARN -|- operator() -|- 0x2b09e48fe700|| -|- read: m64012_200712_164638/117507037/ccs rounded length: 3300 skipped > 100 bp. from best length.
>|> 20201023 01:00:04.205 -|- WARN -|- operator() -|- 0x2b09e5303700|| -|- read: m64012_200712_164638/103941140/ccs rounded length: 3200 skipped > 100 bp. from best length.
>|> 20201023 01:00:04.205 -|- WARN -|- operator() -|- 0x2b09e5303700|| -|- read: m64012_200712_164638/104400993/ccs rounded length: 3200 skipped > 100 bp. from best length.
>|> 20201023 01:00:04.255 -|- WARN -|- operator() -|- 0x2b09e5504700|| -|- read: m64012_200712_164638/57018350/ccs rounded length: 4400 skipped > 100 bp. from best length.
>|> 20201023 01:00:08.098 -|- WARN -|- operator() -|- 0x2b09e4f01700|| -|- read: m64012_200712_164638/150276487/ccs rounded length: 3200 skipped > 100 bp. from best length.
>|> 20201023 01:00:21.520 -|- WARN -|- operator() -|- 0x2b09e4aff700|| -|- read: m64012_200712_164638/93651486/ccs rounded length: 3500 skipped > 100 bp. from best length.
>|> 20201023 01:00:22.925 -|- WARN -|- operator() -|- 0x2b09e4d00700|| -|- read: m64012_200712_164638/119212533/ccs rounded length: 3700 skipped > 100 bp. from best length.
>|> 20201023 01:00:34.185 -|- WARN -|- operator() -|- 0x2b09e4d00700|| -|- read: m64012_200712_164638/12913242/ccs rounded length: 3500 skipped > 100 bp. from best length.
>|> 20201023 01:02:10.390 -|- INFO -|- LaaRunner -|- 0x2b09e3206c00|| -|- pbaa finished without error. Goodbye.