>|> 20201023 00:59:55.721 -|- INFO -|- LaaRunner -|- 0x2af40209ac00|| -|- Welcome to pbaa.

>|> 20201023 00:59:55.862 -|- INFO -|- GraphProcessing -|- 0x2af40209ac00|| -|- 43 sequence entries.
>|> 20201023 00:59:55.862 -|- INFO -|- GraphProcessing -|- 0x2af40209ac00|| -|- 234136 nodes before filtering.
>|> 20201023 00:59:55.930 -|- INFO -|- GraphProcessing -|- 0x2af40209ac00|| -|- 131707 nodes after filtering.

>|> 20201023 00:59:55.930 -|- INFO -|- GetGuideInfo -|- 0x2af40209ac00|| -|- Processing 43 guide loci.
>|> 20201023 00:59:56.014 -|- INFO -|- GetGuideInfo -|- 0x2af40209ac00|| -|- There are 131707 unique kmers within guide sequence(s).

>|> 20201023 00:59:56.671 -|- WARN -|- operator() -|- 0x2af40209ac00|| -|- m64012_200712_164638/97848110/ccs has no guide hits, skipping read.
>|> 20201023 01:00:00.342 -|- INFO -|- ClusterReads -|- 0x2af40209ac00|| -|- Clustered sample: ../fastq_600/demultiplex.24149-HG003.fastq locus: HLA-A nreads: 78 nvariants before filter: 22 nvariants after filter: 22 nclusters: 10

>|> 20201023 01:00:01.847 -|- INFO -|- ClusterReads -|- 0x2af40209ac00|| -|- Clustered sample: ../fastq_600/demultiplex.24149-HG003.fastq locus: HLA-B nreads: 38 nvariants before filter: 20 nvariants after filter: 20 nclusters: 9

>|> 20201023 01:00:02.452 -|- INFO -|- ClusterReads -|- 0x2af40209ac00|| -|- Clustered sample: ../fastq_600/demultiplex.24149-HG003.fastq locus: HLA-C nreads: 91 nvariants before filter: 3 nvariants after filter: 3 nclusters: 7

>|> 20201023 01:00:03.284 -|- INFO -|- ClusterReads -|- 0x2af40209ac00|| -|- Clustered sample: ../fastq_600/demultiplex.24149-HG003.fastq locus: HLA-DPB1 nreads: 76 nvariants before filter: 5 nvariants after filter: 5 nclusters: 10

>|> 20201023 01:00:09.340 -|- INFO -|- ClusterReads -|- 0x2af40209ac00|| -|- Clustered sample: ../fastq_600/demultiplex.24149-HG003.fastq locus: HLA-DQB1 nreads: 164 nvariants before filter: 19 nvariants after filter: 19 nclusters: 9

>|> 20201023 01:00:13.893 -|- INFO -|- ClusterReads -|- 0x2af40209ac00|| -|- Clustered sample: ../fastq_600/demultiplex.24149-HG003.fastq locus: HLA-DRB1 nreads: 152 nvariants before filter: 15 nvariants after filter: 15 nclusters: 9

>|> 20201023 01:00:13.899 -|- INFO -|- LaaRunner -|- 0x2af40209ac00|| -|- Generating consensus sequences for clusters.
>|> 20201023 01:00:13.907 -|- WARN -|- operator() -|- 0x2af403d95700|| -|- read: m64012_200712_164638/3147172/ccs rounded length: 2100 skipped > 100 bp. from best length.
>|> 20201023 01:00:14.820 -|- WARN -|- operator() -|- 0x2af403f96700|| -|- read: m64012_200712_164638/110298920/ccs rounded length: 3300 skipped > 100 bp. from best length.
>|> 20201023 01:00:15.176 -|- WARN -|- operator() -|- 0x2af403993700|| -|- read: m64012_200712_164638/105316675/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:22.521 -|- WARN -|- operator() -|- 0x2af408401700|| -|- read: m64012_200712_164638/115212447/ccs rounded length: 6000 skipped > 100 bp. from best length.
>|> 20201023 01:00:25.836 -|- WARN -|- operator() -|- 0x2af408401700|| -|- read: m64012_200712_164638/174327540/ccs rounded length: 4200 skipped > 100 bp. from best length.
>|> 20201023 01:00:25.846 -|- WARN -|- operator() -|- 0x2af403792700|| -|- read: m64012_200712_164638/82904452/ccs rounded length: 5200 skipped > 100 bp. from best length.
>|> 20201023 01:00:28.380 -|- WARN -|- operator() -|- 0x2af403792700|| -|- read: m64012_200712_164638/107283832/ccs rounded length: 3700 skipped > 100 bp. from best length.
>|> 20201023 01:00:31.205 -|- WARN -|- operator() -|- 0x2af403f96700|| -|- read: m64012_200712_164638/113314583/ccs rounded length: 5200 skipped > 100 bp. from best length.
>|> 20201023 01:00:32.167 -|- WARN -|- operator() -|- 0x2af403993700|| -|- read: m64012_200712_164638/174195499/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:33.040 -|- WARN -|- operator() -|- 0x2af403b94700|| -|- read: m64012_200712_164638/57148627/ccs rounded length: 4400 skipped > 100 bp. from best length.
>|> 20201023 01:00:33.948 -|- WARN -|- operator() -|- 0x2af403591700|| -|- read: m64012_200712_164638/115346118/ccs rounded length: 5200 skipped > 100 bp. from best length.
>|> 20201023 01:00:34.677 -|- WARN -|- operator() -|- 0x2af403591700|| -|- read: m64012_200712_164638/89850661/ccs rounded length: 5100 skipped > 100 bp. from best length.
>|> 20201023 01:00:36.835 -|- WARN -|- operator() -|- 0x2af403b94700|| -|- read: m64012_200712_164638/68157737/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:38.048 -|- WARN -|- operator() -|- 0x2af403b94700|| -|- read: m64012_200712_164638/83756910/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:39.923 -|- WARN -|- operator() -|- 0x2af403993700|| -|- read: m64012_200712_164638/62785033/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:41.113 -|- WARN -|- operator() -|- 0x2af403993700|| -|- read: m64012_200712_164638/70387496/ccs rounded length: 5200 skipped > 100 bp. from best length.
>|> 20201023 01:00:44.146 -|- WARN -|- operator() -|- 0x2af403792700|| -|- read: m64012_200712_164638/163513223/ccs rounded length: 4300 skipped > 100 bp. from best length.
>|> 20201023 01:00:49.612 -|- WARN -|- operator() -|- 0x2af403f96700|| -|- read: m64012_200712_164638/34146173/ccs rounded length: 3900 skipped > 100 bp. from best length.
>|> 20201023 01:00:54.016 -|- WARN -|- operator() -|- 0x2af403792700|| -|- read: m64012_200712_164638/41025542/ccs rounded length: 3100 skipped > 100 bp. from best length.
>|> 20201023 01:01:33.657 -|- INFO -|- LaaRunner -|- 0x2af40209ac00|| -|- pbaa finished without error. Goodbye.