>|> 20201023 00:59:56.057 -|- INFO -|- LaaRunner -|- 0x2b9ef90ebc00|| -|- Welcome to pbaa.

>|> 20201023 00:59:56.226 -|- INFO -|- GraphProcessing -|- 0x2b9ef90ebc00|| -|- 43 sequence entries.
>|> 20201023 00:59:56.226 -|- INFO -|- GraphProcessing -|- 0x2b9ef90ebc00|| -|- 234136 nodes before filtering.
>|> 20201023 00:59:56.311 -|- INFO -|- GraphProcessing -|- 0x2b9ef90ebc00|| -|- 131707 nodes after filtering.

>|> 20201023 00:59:56.311 -|- INFO -|- GetGuideInfo -|- 0x2b9ef90ebc00|| -|- Processing 43 guide loci.
>|> 20201023 00:59:56.455 -|- INFO -|- GetGuideInfo -|- 0x2b9ef90ebc00|| -|- There are 131707 unique kmers within guide sequence(s).

>|> 20201023 00:59:59.314 -|- INFO -|- ClusterReads -|- 0x2b9ef90ebc00|| -|- Clustered sample: ../fastq_600/demultiplex.12878-HG001.fastq locus: HLA-A nreads: 103 nvariants before filter: 8 nvariants after filter: 8 nclusters: 10

>|> 20201023 01:00:01.095 -|- INFO -|- ClusterReads -|- 0x2b9ef90ebc00|| -|- Clustered sample: ../fastq_600/demultiplex.12878-HG001.fastq locus: HLA-B nreads: 43 nvariants before filter: 21 nvariants after filter: 21 nclusters: 10

>|> 20201023 01:00:03.618 -|- INFO -|- ClusterReads -|- 0x2b9ef90ebc00|| -|- Clustered sample: ../fastq_600/demultiplex.12878-HG001.fastq locus: HLA-C nreads: 57 nvariants before filter: 23 nvariants after filter: 23 nclusters: 10

>|> 20201023 01:00:06.081 -|- INFO -|- ClusterReads -|- 0x2b9ef90ebc00|| -|- Clustered sample: ../fastq_600/demultiplex.12878-HG001.fastq locus: HLA-DPB1 nreads: 34 nvariants before filter: 38 nvariants after filter: 38 nclusters: 10

>|> 20201023 01:00:12.710 -|- INFO -|- ClusterReads -|- 0x2b9ef90ebc00|| -|- Clustered sample: ../fastq_600/demultiplex.12878-HG001.fastq locus: HLA-DQB1 nreads: 243 nvariants before filter: 14 nvariants after filter: 14 nclusters: 9

>|> 20201023 01:00:17.399 -|- INFO -|- ClusterReads -|- 0x2b9ef90ebc00|| -|- Clustered sample: ../fastq_600/demultiplex.12878-HG001.fastq locus: HLA-DRB1 nreads: 120 nvariants before filter: 20 nvariants after filter: 20 nclusters: 10

>|> 20201023 01:00:17.402 -|- INFO -|- LaaRunner -|- 0x2b9ef90ebc00|| -|- Generating consensus sequences for clusters.
>|> 20201023 01:00:18.106 -|- WARN -|- operator() -|- 0x2b9efabe5700|| -|- read: m64012_200712_164638/106627764/ccs rounded length: 3200 skipped > 100 bp. from best length.
>|> 20201023 01:00:19.040 -|- WARN -|- operator() -|- 0x2b9efade6700|| -|- read: m64012_200712_164638/53150541/ccs rounded length: 3300 skipped > 100 bp. from best length.
>|> 20201023 01:00:19.375 -|- WARN -|- operator() -|- 0x2b9efade6700|| -|- read: m64012_200712_164638/98239849/ccs rounded length: 2200 skipped > 100 bp. from best length.
>|> 20201023 01:00:21.508 -|- WARN -|- operator() -|- 0x2b9efa9e4700|| -|- read: m64012_200712_164638/155584167/ccs rounded length: 2900 skipped > 100 bp. from best length.
>|> 20201023 01:00:21.795 -|- WARN -|- operator() -|- 0x2b9efabe5700|| -|- read: m64012_200712_164638/175508002/ccs rounded length: 3000 skipped > 100 bp. from best length.
>|> 20201023 01:00:26.659 -|- WARN -|- operator() -|- 0x2b9efa7e3700|| -|- read: m64012_200712_164638/36700729/ccs rounded length: 3300 skipped > 100 bp. from best length.
>|> 20201023 01:00:27.454 -|- WARN -|- operator() -|- 0x2b9efafe7700|| -|- read: m64012_200712_164638/100861023/ccs rounded length: 4000 skipped > 100 bp. from best length.
>|> 20201023 01:00:27.917 -|- WARN -|- operator() -|- 0x2b9efa5e2700|| -|- read: m64012_200712_164638/44106605/ccs rounded length: 4800 skipped > 100 bp. from best length.
>|> 20201023 01:00:29.102 -|- WARN -|- operator() -|- 0x2b9efa5e2700|| -|- read: m64012_200712_164638/69075055/ccs rounded length: 5400 skipped > 100 bp. from best length.
>|> 20201023 01:00:32.371 -|- WARN -|- operator() -|- 0x2b9efade6700|| -|- read: m64012_200712_164638/27526500/ccs rounded length: 2700 skipped > 100 bp. from best length.
>|> 20201023 01:00:32.371 -|- WARN -|- operator() -|- 0x2b9efade6700|| -|- read: m64012_200712_164638/53215334/ccs rounded length: 2600 skipped > 100 bp. from best length.
>|> 20201023 01:00:35.404 -|- WARN -|- operator() -|- 0x2b9efafe7700|| -|- read: m64012_200712_164638/146801337/ccs rounded length: 3900 skipped > 100 bp. from best length.
>|> 20201023 01:00:40.248 -|- WARN -|- operator() -|- 0x2b9efb1e8700|| -|- read: m64012_200712_164638/789158/ccs rounded length: 3700 skipped > 100 bp. from best length.
>|> 20201023 01:00:53.750 -|- WARN -|- operator() -|- 0x2b9efafe7700|| -|- read: m64012_200712_164638/71828319/ccs rounded length: 3900 skipped > 100 bp. from best length.
>|> 20201023 01:01:18.560 -|- INFO -|- LaaRunner -|- 0x2b9ef90ebc00|| -|- pbaa finished without error. Goodbye.