>|> 20201023 00:59:56.024 -|- INFO -|- LaaRunner -|- 0x2b6860e3dc00|| -|- Welcome to pbaa.

>|> 20201023 00:59:56.129 -|- INFO -|- GraphProcessing -|- 0x2b6860e3dc00|| -|- 43 sequence entries.
>|> 20201023 00:59:56.129 -|- INFO -|- GraphProcessing -|- 0x2b6860e3dc00|| -|- 234136 nodes before filtering.
>|> 20201023 00:59:56.199 -|- INFO -|- GraphProcessing -|- 0x2b6860e3dc00|| -|- 131707 nodes after filtering.

>|> 20201023 00:59:56.199 -|- INFO -|- GetGuideInfo -|- 0x2b6860e3dc00|| -|- Processing 43 guide loci.
>|> 20201023 00:59:56.283 -|- INFO -|- GetGuideInfo -|- 0x2b6860e3dc00|| -|- There are 131707 unique kmers within guide sequence(s).

>|> 20201023 00:59:56.853 -|- WARN -|- operator() -|- 0x2b6860e3dc00|| -|- m64012_200712_164638/18612834/ccs has no guide hits, skipping read.
>|> 20201023 00:59:59.790 -|- INFO -|- ClusterReads -|- 0x2b6860e3dc00|| -|- Clustered sample: ../fastq_600/demultiplex.06896-3.fastq locus: HLA-A nreads: 56 nvariants before filter: 26 nvariants after filter: 26 nclusters: 7

>|> 20201023 01:00:01.252 -|- INFO -|- ClusterReads -|- 0x2b6860e3dc00|| -|- Clustered sample: ../fastq_600/demultiplex.06896-3.fastq locus: HLA-B nreads: 38 nvariants before filter: 20 nvariants after filter: 20 nclusters: 10

>|> 20201023 01:00:02.920 -|- INFO -|- ClusterReads -|- 0x2b6860e3dc00|| -|- Clustered sample: ../fastq_600/demultiplex.06896-3.fastq locus: HLA-C nreads: 59 nvariants before filter: 14 nvariants after filter: 14 nclusters: 10

>|> 20201023 01:00:03.307 -|- INFO -|- ClusterReads -|- 0x2b6860e3dc00|| -|- Clustered sample: ../fastq_600/demultiplex.06896-3.fastq locus: HLA-DPB1 nreads: 43 nvariants before filter: 4 nvariants after filter: 4 nclusters: 8

>|> 20201023 01:00:13.841 -|- INFO -|- ClusterReads -|- 0x2b6860e3dc00|| -|- Clustered sample: ../fastq_600/demultiplex.06896-3.fastq locus: HLA-DQB1 nreads: 290 nvariants before filter: 16 nvariants after filter: 16 nclusters: 10

>|> 20201023 01:00:14.585 -|- INFO -|- ClusterReads -|- 0x2b6860e3dc00|| -|- Clustered sample: ../fastq_600/demultiplex.06896-3.fastq locus: HLA-DRB1 nreads: 113 nvariants before filter: 3 nvariants after filter: 3 nclusters: 7

>|> 20201023 01:00:14.586 -|- INFO -|- LaaRunner -|- 0x2b6860e3dc00|| -|- Generating consensus sequences for clusters.
>|> 20201023 01:00:14.641 -|- WARN -|- operator() -|- 0x2b6862736700|| -|- read: m64012_200712_164638/180225213/ccs rounded length: 3400 skipped > 100 bp. from best length.
>|> 20201023 01:00:15.060 -|- WARN -|- operator() -|- 0x2b6862d39700|| -|- read: m64012_200712_164638/105973566/ccs rounded length: 3200 skipped > 100 bp. from best length.
>|> 20201023 01:00:19.036 -|- WARN -|- operator() -|- 0x2b6862f3a700|| -|- read: m64012_200712_164638/38144060/ccs rounded length: 2900 skipped > 100 bp. from best length.
>|> 20201023 01:00:19.101 -|- WARN -|- operator() -|- 0x2b6862937700|| -|- read: m64012_200712_164638/126222360/ccs rounded length: 5000 skipped > 100 bp. from best length.
>|> 20201023 01:00:19.959 -|- WARN -|- operator() -|- 0x2b6862937700|| -|- read: m64012_200712_164638/155257018/ccs rounded length: 5000 skipped > 100 bp. from best length.
>|> 20201023 01:00:19.959 -|- WARN -|- operator() -|- 0x2b6862937700|| -|- read: m64012_200712_164638/33426196/ccs rounded length: 5800 skipped > 100 bp. from best length.
>|> 20201023 01:00:19.959 -|- WARN -|- operator() -|- 0x2b6862937700|| -|- read: m64012_200712_164638/77988361/ccs rounded length: 5900 skipped > 100 bp. from best length.
>|> 20201023 01:00:22.385 -|- WARN -|- operator() -|- 0x2b6862d39700|| -|- read: m64012_200712_164638/139854258/ccs rounded length: 5300 skipped > 100 bp. from best length.
>|> 20201023 01:00:24.776 -|- WARN -|- operator() -|- 0x2b6862d39700|| -|- read: m64012_200712_164638/16189668/ccs rounded length: 4500 skipped > 100 bp. from best length.
>|> 20201023 01:00:27.175 -|- WARN -|- operator() -|- 0x2b6862d39700|| -|- read: m64012_200712_164638/171051280/ccs rounded length: 5500 skipped > 100 bp. from best length.
>|> 20201023 01:00:27.175 -|- WARN -|- operator() -|- 0x2b6862d39700|| -|- read: m64012_200712_164638/18153906/ccs rounded length: 5400 skipped > 100 bp. from best length.
>|> 20201023 01:00:47.081 -|- WARN -|- operator() -|- 0x2b686313b700|| -|- read: m64012_200712_164638/51840478/ccs rounded length: 2400 skipped > 100 bp. from best length.
>|> 20201023 01:00:49.510 -|- WARN -|- operator() -|- 0x2b686313b700|| -|- read: m64012_200712_164638/82052744/ccs rounded length: 3500 skipped > 100 bp. from best length.
>|> 20201023 01:01:22.020 -|- INFO -|- LaaRunner -|- 0x2b6860e3dc00|| -|- pbaa finished without error. Goodbye.