>|> 20220329 04:25:15.470 -|- INFO -|- LaaRunner -|- 0x7f503d048740|| -|- Welcome to pbaa. >|> 20220329 04:25:15.475 -|- INFO -|- GraphProcessing -|- 0x7f503d048740|| -|- 1 sequence entries. >|> 20220329 04:25:15.475 -|- INFO -|- GraphProcessing -|- 0x7f503d048740|| -|- 4507 nodes before filtering. >|> 20220329 04:25:15.476 -|- INFO -|- GraphProcessing -|- 0x7f503d048740|| -|- 4507 nodes after filtering. >|> 20220329 04:25:15.476 -|- INFO -|- GetGuideInfo -|- 0x7f503d048740|| -|- Processing 1 guide loci. >|> 20220329 04:25:15.476 -|- INFO -|- GetGuideInfo -|- 0x7f503d048740|| -|- There are 4507 unique kmers within guide sequence(s). >|> 20220329 04:25:15.579 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/918828/ccs has no guide hits, skipping read. >|> 20220329 04:25:15.724 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/4063643/ccs has no guide hits, skipping read. >|> 20220329 04:25:16.145 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/11338396/ccs has no guide hits, skipping read. >|> 20220329 04:25:16.248 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/13502540/ccs has no guide hits, skipping read. >|> 20220329 04:25:16.328 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/15009052/ccs has no guide hits, skipping read. >|> 20220329 04:25:16.456 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/17173189/ccs has no guide hits, skipping read. >|> 20220329 04:25:16.585 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/18744479/ccs has no guide hits, skipping read. >|> 20220329 04:25:16.712 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/21169608/ccs has no guide hits, skipping read. >|> 20220329 04:25:17.039 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/27199027/ccs has no guide hits, skipping read. >|> 20220329 04:25:18.110 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/40831341/ccs has no guide hits, skipping read. >|> 20220329 04:25:18.274 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/43057492/ccs has no guide hits, skipping read. >|> 20220329 04:25:18.616 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/45615833/ccs has no guide hits, skipping read. >|> 20220329 04:25:18.723 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/47514419/ccs has no guide hits, skipping read. >|> 20220329 04:25:18.845 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/49613223/ccs has no guide hits, skipping read. >|> 20220329 04:25:19.821 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/65537801/ccs has no guide hits, skipping read. >|> 20220329 04:25:20.023 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/68553061/ccs has no guide hits, skipping read. >|> 20220329 04:25:20.241 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/71370102/ccs has no guide hits, skipping read. >|> 20220329 04:25:20.324 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/73009726/ccs has no guide hits, skipping read. >|> 20220329 04:25:20.693 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/79627844/ccs has no guide hits, skipping read. >|> 20220329 04:25:20.743 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/80543817/ccs has no guide hits, skipping read. >|> 20220329 04:25:20.969 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/83954148/ccs has no guide hits, skipping read. >|> 20220329 04:25:21.268 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/87885970/ccs has no guide hits, skipping read. >|> 20220329 04:25:21.962 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/94242180/ccs has no guide hits, skipping read. >|> 20220329 04:25:22.277 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/96667426/ccs has no guide hits, skipping read. >|> 20220329 04:25:22.468 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/99287076/ccs has no guide hits, skipping read. >|> 20220329 04:25:22.801 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/103678980/ccs has no guide hits, skipping read. >|> 20220329 04:25:22.997 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/107217940/ccs has no guide hits, skipping read. >|> 20220329 04:25:23.327 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/113443397/ccs has no guide hits, skipping read. >|> 20220329 04:25:23.746 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/119996732/ccs has no guide hits, skipping read. >|> 20220329 04:25:23.895 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/122685050/ccs has no guide hits, skipping read. >|> 20220329 04:25:23.928 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/123275557/ccs has no guide hits, skipping read. >|> 20220329 04:25:23.965 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/123995617/ccs has no guide hits, skipping read. >|> 20220329 04:25:24.163 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/127534653/ccs has no guide hits, skipping read. >|> 20220329 04:25:24.431 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/132383248/ccs has no guide hits, skipping read. >|> 20220329 04:25:24.452 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/132713031/ccs has no guide hits, skipping read. >|> 20220329 04:25:24.461 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/132908528/ccs has no guide hits, skipping read. >|> 20220329 04:25:25.429 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/146867358/ccs has no guide hits, skipping read. >|> 20220329 04:25:25.440 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/147063452/ccs has no guide hits, skipping read. >|> 20220329 04:25:25.701 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/151456001/ccs has no guide hits, skipping read. >|> 20220329 04:25:25.714 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/151652739/ccs has no guide hits, skipping read. >|> 20220329 04:25:25.743 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/152241762/ccs has no guide hits, skipping read. >|> 20220329 04:25:25.780 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/152830898/ccs has no guide hits, skipping read. >|> 20220329 04:25:26.004 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/157024792/ccs has no guide hits, skipping read. >|> 20220329 04:25:26.150 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/159450862/ccs has no guide hits, skipping read. >|> 20220329 04:25:26.371 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/163709044/ccs has no guide hits, skipping read. >|> 20220329 04:25:26.570 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/166133957/ccs has no guide hits, skipping read. >|> 20220329 04:25:26.744 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/169215547/ccs has no guide hits, skipping read. >|> 20220329 04:25:26.812 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/170590599/ccs has no guide hits, skipping read. >|> 20220329 04:25:26.872 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/171902972/ccs has no guide hits, skipping read. >|> 20220329 04:25:27.010 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/174327699/ccs has no guide hits, skipping read. >|> 20220329 04:25:27.071 -|- WARN -|- operator() -|- 0x7f503d048740|| -|- m64013e_210223_231140/175440582/ccs has no guide hits, skipping read. >|> 20220329 04:26:34.052 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/132120663/ccs QV: 19.9942 skipped < Q20. >|> 20220329 04:26:43.994 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/139987664/ccs QV: 19.9833 skipped < Q20. >|> 20220329 04:26:48.670 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/143526014/ccs QV: 19.9873 skipped < Q20. >|> 20220329 04:27:16.948 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/165020238/ccs QV: 19.9961 skipped < Q20. >|> 20220329 04:27:18.060 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/165873520/ccs QV: 19.9989 skipped < Q20. >|> 20220329 04:27:19.562 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/167053515/ccs QV: 19.9939 skipped < Q20. >|> 20220329 04:27:22.735 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/169674809/ccs QV: 19.998 skipped < Q20. >|> 20220329 04:27:37.387 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/19139002/ccs QV: 19.9933 skipped < Q20. >|> 20220329 04:27:54.454 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/31525583/ccs QV: 19.9859 skipped < Q20. >|> 20220329 04:28:05.764 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/39323151/ccs QV: 19.9984 skipped < Q20. >|> 20220329 04:28:10.679 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/42797130/ccs QV: 19.9929 skipped < Q20. >|> 20220329 04:28:11.138 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/43188409/ccs QV: 19.9953 skipped < Q20. >|> 20220329 04:28:27.061 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/53216013/ccs QV: 19.9846 skipped < Q20. >|> 20220329 04:28:35.138 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/59638406/ccs QV: 19.9871 skipped < Q20. >|> 20220329 04:28:42.312 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/65080095/ccs QV: 19.9904 skipped < Q20. >|> 20220329 04:28:48.067 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/6948524/ccs rounded length: 16400 skipped > 100 bp. >|> 20220329 04:28:52.547 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/7341744/ccs QV: 19.9861 skipped < Q20. >|> 20220329 04:28:55.273 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/7538730/ccs QV: 19.9844 skipped < Q20. >|> 20220329 04:29:04.796 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/83102243/ccs QV: 19.9982 skipped < Q20. >|> 20220329 04:29:20.423 -|- WARN -|- BuildKFG -|- 0x7f503d048740|| -|- read: m64013e_210223_231140/96208449/ccs QV: 19.9896 skipped < Q20. >|> 20220329 04:32:49.450 -|- INFO -|- RunAlignments -|- 0x7f503d048740|| -|- Finished 998978 valid pairwise alignments in 185727 ms >|> 20220329 04:36:59.656 -|- INFO -|- ChimeraDetection -|- 0x7f503d048740|| -|- Running UCHIME algorithm. >|> 20220329 04:37:00.656 -|- INFO -|- LaaRunner -|- 0x7f503d048740|| -|- Finished without error. >|> 20220329 04:37:00.656 -|- INFO -|- LaaRunner -|- 0x7f503d048740|| -|- Real time : 11m 45s >|> 20220329 04:37:00.656 -|- INFO -|- LaaRunner -|- 0x7f503d048740|| -|- CPU time : 1h 6m 973us >|> 20220329 04:37:00.656 -|- INFO -|- LaaRunner -|- 0x7f503d048740|| -|- Peak RSS : 29.470 GB