Classifications
-------------
Input   : 1476192
Passed  : 664623 (45.02%)
Removed : 811569 (54.98%)

Unique genes       : 25334
Unique transcripts : 303332

Classifications, by isoform
-------------
Full splice match       : 162027 (24.38%)
Incomplete splice match : 264633 (39.82%)
Novel in catalog        : 121414 (18.27%)
Novel not in catalog    : 107170 (16.12%)
Antisense               : 1594 (0.24%)
Genic intron            : 0 (0.00%)
Genic genomic           : 1086 (0.16%)
Intergenic              : 2741 (0.41%)
Other                   : 3958 (0.60%)

Classifications, by read
-------------
Full splice match       : 28926826 (75.27%)
Incomplete splice match : 7205830 (18.75%)
Novel in catalog        : 1315334 (3.42%)
Novel not in catalog    : 941639 (2.45%)
Antisense               : 6971 (0.02%)
Genic intron            : 0 (0.00%)
Genic genomic           : 5084 (0.01%)
Intergenic              : 10833 (0.03%)
Other                   : 18513 (0.05%)

Junctions
-----------
Known canonical     : 4758366 (96.10%)
Known non-canonical : 363 (0.01%)
Novel canonical     : 192738 (3.89%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 21721 (85.74%)
Novel : 3613 (14.26%)

Filter reasons
----------------
Intrapriming               : 386173 (47.58%)
Monoexonic                 : 0 (0.00%)
RT switching               : 11362 (1.40%)
Low coverage/non-canonical : 414034 (51.02%)