Index of /public/dataset/Sequel-IIe-202104/metagenomics

Icon  Name                                         Last modified      Size  Description
[PARENTDIR] Parent Directory                                                  -   
[TXT] README.txt                                   2021-04-22 14:37  1.3K  
[   ] m64011_210224_000525.hifi_reads.bam          2021-03-05 16:54   11G  
[   ] m64011_210224_000525.hifi_reads.fasta.tar.gz 2021-04-22 16:12  5.4G  
[   ] m64011_210224_000525.hifi_reads.fastq.tar.gz 2021-04-22 16:24   11G  
[   ] m64011_210225_094432.hifi_reads.bam          2021-03-05 16:58  9.4G  
[   ] m64011_210225_094432.hifi_reads.fasta.tar.gz 2021-04-22 17:10  4.5G  
[   ] m64011_210225_094432.hifi_reads.fastq.tar.gz 2021-04-22 17:31  9.2G  
[   ] m64011_210226_210143.hifi_reads.bam          2021-03-05 17:03   12G  
[   ] m64011_210226_210143.hifi_reads.fasta.tar.gz 2021-04-22 18:19  5.5G  
[   ] m64011_210226_210143.hifi_reads.fastq.tar.gz 2021-04-22 18:53   12G  
[   ] m64011_210228_064650.hifi_reads.bam          2021-03-05 17:07  9.4G  
[   ] m64011_210228_064650.hifi_reads.fasta.tar.gz 2021-04-23 10:22  4.4G  
[   ] m64011_210228_064650.hifi_reads.fastq.tar.gz 2021-04-23 10:33  9.2G  

OVERVIEW                                                                                                                                                                                                                                                                         
   This dataset is an example of the output format for the Sequel® IIe System.
 
METHODS
    Samples         Four gut microbiome pooled standards (see movie information)
    Library prep    SMRTbell® Express Template Prep Kit 2.0 + Enzyme Clean Up Kit  2.0
    Sequencing      Sequel IIe System with Sequel II Binding Kit 2.2 chemistry 2.0
    Run time		30hr movie; 2 hr pre-extension
    Software        ICS v10.0, SMRT® Link v10.1 and CCS v6.0.0
 
MOVIE
    m64011_210224_000525 - The BioCollective pooled gut microbiome sample 138274; 10.3kb insert 
    m64011_210225_094432 - The BioCollective pooled gut microbiome sample 138390; 9.2kb insert
    m64011_210226_210143 - The BioCollective pooled gut microbiome sample 139369; 9.8kb insert
    m64011_210228_064650 - The BioCollective pooled gut microbiome sample 139445; 8.6kb insert
 
DATA FILES
    [movie].hifi_reads.bam       HiFi reads, subset of [movie].reads.bam
    [movie].hifi_reads.fastq.gz  HiFi reads, FASTQ format
    [movie].hifi_reads.fasta.gz  HiFi reads, FASTA format