Index of /public/dataset/SV-HG002-CLR
Name Last modified Size Description
Parent Directory -
m64013_190124_221354.subreadset.xml 2019-02-27 11:48 3.3K
m64013_190124_221354.subreads.bam.pbi 2019-01-25 11:10 57M
m64013_190124_221354.subreads.bam 2019-01-25 11:10 161G
hs37d5.HG002-SequelII-CLR.sv.vcf.gz.tbi 2019-02-27 20:36 370K
hs37d5.HG002-SequelII-CLR.sv.vcf.gz 2019-02-27 20:36 4.3M
hs37d5.HG002-SequelII-CLR.bam.bai 2019-02-27 15:10 32M
hs37d5.HG002-SequelII-CLR.bam 2019-02-27 14:52 42G
README.txt 2019-02-28 11:46 495
MD5.txt 2019-02-27 21:25 486
SAMPLE
HG002 extracted DNA
METHODS
Shearing 75 kb with Megaruptor
Library prep SMRTbell Express 2.0
Size selection >30 kb with BluePippin
Sequencing Sequel System II with "Early Access" binding kit (101-490-800) and chemistry (101-490-900)
Run time 15 hrs per SMRT Cell
Reference hs37d5 (GRCh37 with decoy)
Variant Calling Structural Variant Calling analysis in SMRT Link 6.1
DOWNLOAD
MD5 checksums are listed in MD5.txt