Index of /public/dataset/SV-HG002-CLR

Icon  Name                                    Last modified      Size  Description
[PARENTDIR] Parent Directory - [TXT] README.txt 2019-02-28 11:46 495 [TXT] MD5.txt 2019-02-27 21:25 486 [   ] hs37d5.HG002-SequelII-CLR.sv.vcf.gz.tbi 2019-02-27 20:36 370K [   ] hs37d5.HG002-SequelII-CLR.sv.vcf.gz 2019-02-27 20:36 4.3M [   ] hs37d5.HG002-SequelII-CLR.bam.bai 2019-02-27 15:10 32M [   ] hs37d5.HG002-SequelII-CLR.bam 2019-02-27 14:52 42G [TXT] m64013_190124_221354.subreadset.xml 2019-02-27 11:48 3.3K [   ] m64013_190124_221354.subreads.bam.pbi 2019-01-25 11:10 57M [   ] m64013_190124_221354.subreads.bam 2019-01-25 11:10 161G
SAMPLE
    HG002 extracted DNA

METHODS
    Shearing         75 kb with Megaruptor
    Library prep     SMRTbell Express 2.0
    Size selection   >30 kb with BluePippin
    Sequencing       Sequel System II with "Early Access" binding kit (101-490-800) and chemistry (101-490-900)
    Run time         15 hrs per SMRT Cell
    Reference        hs37d5 (GRCh37 with decoy)
    Variant Calling  Structural Variant Calling analysis in SMRT Link 6.1

DOWNLOAD
    MD5 checksums are listed in MD5.txt