Classifications
-------------
Input   : 898505
Passed  : 239998 (26.71%)
Removed : 658507 (73.29%)

Unique genes       : 30022
Unique transcripts : 201084

Classifications, by isoform
-------------
Full splice match       : 40935 (17.06%)
Incomplete splice match : 47956 (19.98%)
Novel in catalog        : 31047 (12.94%)
Novel not in catalog    : 106071 (44.20%)
Antisense               : 3755 (1.56%)
Genic intron            : 0 (0.00%)
Genic genomic           : 2540 (1.06%)
Intergenic              : 5602 (2.33%)
Other                   : 2092 (0.87%)

Classifications, by read
-------------
Full splice match       : NA
Incomplete splice match : NA
Novel in catalog        : NA
Novel not in catalog    : NA
Antisense               : NA
Genic intron            : NA
Genic genomic           : NA
Intergenic              : NA
Other                   : NA

Junctions
-----------
Known canonical     : 697608 (81.87%)
Known non-canonical : 43 (0.01%)
Novel canonical     : 154401 (18.12%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 22415 (74.66%)
Novel : 7607 (25.34%)

Filter reasons
----------------
Intrapriming               : 152511 (23.16%)
Monoexonic                 : 0 (0.00%)
RT switching               : 23826 (3.62%)
Low coverage/non-canonical : 482170 (73.22%)