# IPython log file

from csv import DictReader
reader = DictReader(open('pigeon.filtered_lite_classification.txt'),delimiter='\t')
f = open('pigeon.for_subsampling.txt', 'w')
f.write('pbid\tpbgene\tlength\trefisoform\trefgene\tcategory\tfl_count\n')
for r in reader:
	f.write(r['isoform']+'\t')
	f.write(r['isoform'].split('.')[1]+'\t')
	f.write(r['length']+'\t')
	f.write(r['associated_transcript']+'\t')
	f.write(r['associated_gene']+'\t')
	f.write(r['structural_category']+'\t')
	f.write(r['fl_assoc']+'\n')
f.close()