Classifications
-------------
Input   : 1741315
Passed  : 558113 (32.05%)
Removed : 1183202 (67.95%)

Unique genes       : 25795
Unique transcripts : 228515

Classifications, by isoform
-------------
Full splice match       : 130505 (23.38%)
Incomplete splice match : 261895 (46.93%)
Novel in catalog        : 83814 (15.02%)
Novel not in catalog    : 72591 (13.01%)
Antisense               : 2241 (0.40%)
Genic intron            : 0 (0.00%)
Genic genomic           : 724 (0.13%)
Intergenic              : 3896 (0.70%)
Other                   : 2447 (0.44%)

Classifications, by read
-------------
Full splice match       : 17056754 (56.91%)
Incomplete splice match : 11621485 (38.77%)
Novel in catalog        : 778756 (2.60%)
Novel not in catalog    : 456287 (1.52%)
Antisense               : 22272 (0.07%)
Genic intron            : 0 (0.00%)
Genic genomic           : 3685 (0.01%)
Intergenic              : 23123 (0.08%)
Other                   : 9397 (0.03%)

Junctions
-----------
Known canonical     : 2848543 (95.35%)
Known non-canonical : 257 (0.01%)
Novel canonical     : 138679 (4.64%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 21026 (81.51%)
Novel : 4769 (18.49%)

Filter reasons
----------------
Intrapriming               : 528111 (44.63%)
Monoexonic                 : 0 (0.00%)
RT switching               : 11038 (0.93%)
Low coverage/non-canonical : 644053 (54.43%)