Classifications
-------------
Input   : 300032
Passed  : 158273 (52.75%)
Removed : 141759 (47.25%)

Unique genes       : 15884
Unique transcripts : 73486

Classifications, by isoform
-------------
Full splice match       : 56978 (36.00%)
Incomplete splice match : 66144 (41.79%)
Novel in catalog        : 21859 (13.81%)
Novel not in catalog    : 12353 (7.80%)
Antisense               : 156 (0.10%)
Genic intron            : 0 (0.00%)
Genic genomic           : 129 (0.08%)
Intergenic              : 310 (0.20%)
Other                   : 344 (0.22%)

Classifications, by read
-------------
Full splice match       : 3318297 (81.39%)
Incomplete splice match : 547035 (13.42%)
Novel in catalog        : 134184 (3.29%)
Novel not in catalog    : 74049 (1.82%)
Antisense               : 552 (0.01%)
Genic intron            : 0 (0.00%)
Genic genomic           : 1013 (0.02%)
Intergenic              : 882 (0.02%)
Other                   : 1203 (0.03%)

Junctions
-----------
Known canonical     : 1127451 (98.11%)
Known non-canonical : 160 (0.01%)
Novel canonical     : 21593 (1.88%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 15447 (97.25%)
Novel : 437 (2.75%)

Filter reasons
----------------
Intrapriming               : 60195 (42.46%)
Monoexonic                 : 0 (0.00%)
RT switching               : 2962 (2.09%)
Low coverage/non-canonical : 78602 (55.45%)