Classifications
-------------
Input   : 305417
Passed  : 158603 (51.93%)
Removed : 146814 (48.07%)

Unique genes       : 15927
Unique transcripts : 73375

Classifications, by isoform
-------------
Full splice match       : 57217 (36.08%)
Incomplete splice match : 66783 (42.11%)
Novel in catalog        : 21424 (13.51%)
Novel not in catalog    : 12253 (7.73%)
Antisense               : 168 (0.11%)
Genic intron            : 0 (0.00%)
Genic genomic           : 149 (0.09%)
Intergenic              : 279 (0.18%)
Other                   : 330 (0.21%)

Classifications, by read
-------------
Full splice match       : 3406538 (81.05%)
Incomplete splice match : 568308 (13.52%)
Novel in catalog        : 130121 (3.10%)
Novel not in catalog    : 93947 (2.24%)
Antisense               : 572 (0.01%)
Genic intron            : 0 (0.00%)
Genic genomic           : 1150 (0.03%)
Intergenic              : 874 (0.02%)
Other                   : 1359 (0.03%)

Junctions
-----------
Known canonical     : 1102225 (98.07%)
Known non-canonical : 139 (0.01%)
Novel canonical     : 21545 (1.92%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 15514 (97.41%)
Novel : 413 (2.59%)

Filter reasons
----------------
Intrapriming               : 63211 (43.06%)
Monoexonic                 : 0 (0.00%)
RT switching               : 2717 (1.85%)
Low coverage/non-canonical : 80886 (55.09%)