Classifications
-------------
Input   : 610951
Passed  : 279476 (45.74%)
Removed : 331475 (54.26%)

Unique genes       : 19443
Unique transcripts : 129051

Classifications, by isoform
-------------
Full splice match       : 86591 (30.98%)
Incomplete splice match : 113847 (40.74%)
Novel in catalog        : 46275 (16.56%)
Novel not in catalog    : 30188 (10.80%)
Antisense               : 478 (0.17%)
Genic intron            : 0 (0.00%)
Genic genomic           : 335 (0.12%)
Intergenic              : 848 (0.30%)
Other                   : 914 (0.33%)

Classifications, by read
-------------
Full splice match       : 7596740 (80.33%)
Incomplete splice match : 1318308 (13.94%)
Novel in catalog        : 339094 (3.59%)
Novel not in catalog    : 192084 (2.03%)
Antisense               : 1720 (0.02%)
Genic intron            : 0 (0.00%)
Genic genomic           : 2645 (0.03%)
Intergenic              : 2633 (0.03%)
Other                   : 3504 (0.04%)

Junctions
-----------
Known canonical     : 1981837 (97.35%)
Known non-canonical : 222 (0.01%)
Novel canonical     : 53783 (2.64%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 18260 (93.92%)
Novel : 1183 (6.08%)

Filter reasons
----------------
Intrapriming               : 158785 (47.90%)
Monoexonic                 : 0 (0.00%)
RT switching               : 5602 (1.69%)
Low coverage/non-canonical : 167088 (50.41%)