Classifications
-------------
Input   : 449652
Passed  : 219585 (48.83%)
Removed : 230067 (51.17%)

Unique genes       : 17627
Unique transcripts : 100588

Classifications, by isoform
-------------
Full splice match       : 72791 (33.15%)
Incomplete splice match : 90703 (41.31%)
Novel in catalog        : 34003 (15.49%)
Novel not in catalog    : 20515 (9.34%)
Antisense               : 270 (0.12%)
Genic intron            : 0 (0.00%)
Genic genomic           : 211 (0.10%)
Intergenic              : 510 (0.23%)
Other                   : 582 (0.27%)

Classifications, by read
-------------
Full splice match       : 5476270 (81.07%)
Incomplete splice match : 910296 (13.48%)
Novel in catalog        : 232522 (3.44%)
Novel not in catalog    : 129771 (1.92%)
Antisense               : 963 (0.01%)
Genic intron            : 0 (0.00%)
Genic genomic           : 1678 (0.02%)
Intergenic              : 1621 (0.02%)
Other                   : 2179 (0.03%)

Junctions
-----------
Known canonical     : 1564814 (97.72%)
Known non-canonical : 179 (0.01%)
Novel canonical     : 36365 (2.27%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 16910 (95.93%)
Novel : 717 (4.07%)

Filter reasons
----------------
Intrapriming               : 104788 (45.55%)
Monoexonic                 : 0 (0.00%)
RT switching               : 4200 (1.83%)
Low coverage/non-canonical : 121079 (52.63%)