Classifications
-------------
Input   : 500065
Passed  : 234922 (46.98%)
Removed : 265143 (53.02%)

Unique genes       : 18513
Unique transcripts : 107319

Classifications, by isoform
-------------
Full splice match       : 76873 (32.72%)
Incomplete splice match : 97528 (41.52%)
Novel in catalog        : 35915 (15.29%)
Novel not in catalog    : 22651 (9.64%)
Antisense               : 334 (0.14%)
Genic intron            : 0 (0.00%)
Genic genomic           : 283 (0.12%)
Intergenic              : 682 (0.29%)
Other                   : 656 (0.28%)

Classifications, by read
-------------
Full splice match       : 6095736 (80.70%)
Incomplete splice match : 1052102 (13.93%)
Novel in catalog        : 254819 (3.37%)
Novel not in catalog    : 143137 (1.89%)
Antisense               : 1302 (0.02%)
Genic intron            : 0 (0.00%)
Genic genomic           : 2284 (0.03%)
Intergenic              : 2103 (0.03%)
Other                   : 2530 (0.03%)

Junctions
-----------
Known canonical     : 1624053 (97.58%)
Known non-canonical : 184 (0.01%)
Novel canonical     : 40017 (2.40%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 17576 (94.94%)
Novel : 937 (5.06%)

Filter reasons
----------------
Intrapriming               : 123841 (46.71%)
Monoexonic                 : 0 (0.00%)
RT switching               : 4231 (1.60%)
Low coverage/non-canonical : 137071 (51.70%)