Classifications
-------------
Input   : 389927
Passed  : 200280 (51.36%)
Removed : 189647 (48.64%)

Unique genes       : 16775
Unique transcripts : 92098

Classifications, by isoform
-------------
Full splice match       : 67705 (33.81%)
Incomplete splice match : 81919 (40.90%)
Novel in catalog        : 31603 (15.78%)
Novel not in catalog    : 17810 (8.89%)
Antisense               : 173 (0.09%)
Genic intron            : 0 (0.00%)
Genic genomic           : 171 (0.09%)
Intergenic              : 405 (0.20%)
Other                   : 494 (0.25%)

Classifications, by read
-------------
Full splice match       : 4156602 (80.18%)
Incomplete splice match : 712237 (13.74%)
Novel in catalog        : 201089 (3.88%)
Novel not in catalog    : 109661 (2.12%)
Antisense               : 568 (0.01%)
Genic intron            : 0 (0.00%)
Genic genomic           : 1069 (0.02%)
Intergenic              : 1188 (0.02%)
Other                   : 1573 (0.03%)

Junctions
-----------
Known canonical     : 1542253 (98.00%)
Known non-canonical : 178 (0.01%)
Novel canonical     : 31287 (1.99%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 16237 (96.79%)
Novel : 538 (3.21%)

Filter reasons
----------------
Intrapriming               : 87517 (46.15%)
Monoexonic                 : 0 (0.00%)
RT switching               : 3741 (1.97%)
Low coverage/non-canonical : 98389 (51.88%)