Classifications
-------------
Input   : 200918
Passed  : 98211 (48.88%)
Removed : 102707 (51.12%)

Unique genes       : 16575
Unique transcripts : 76625

Classifications, by isoform
-------------
Full splice match       : 42757 (43.54%)
Incomplete splice match : 11928 (12.15%)
Novel in catalog        : 26305 (26.78%)
Novel not in catalog    : 16148 (16.44%)
Antisense               : 198 (0.20%)
Genic intron            : 0 (0.00%)
Genic genomic           : 158 (0.16%)
Intergenic              : 241 (0.25%)
Other                   : 476 (0.48%)

Classifications, by read
-------------
Full splice match       : NA
Incomplete splice match : NA
Novel in catalog        : NA
Novel not in catalog    : NA
Antisense               : NA
Genic intron            : NA
Genic genomic           : NA
Intergenic              : NA
Other                   : NA

Junctions
-----------
Known canonical     : 746435 (96.30%)
Known non-canonical : 118 (0.02%)
Novel canonical     : 28590 (3.69%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 16181 (97.62%)
Novel : 394 (2.38%)

Filter reasons
----------------
Intrapriming               : 81933 (79.77%)
Monoexonic                 : 0 (0.00%)
RT switching               : 3286 (3.20%)
Low coverage/non-canonical : 17488 (17.03%)