Classifications
-------------
Input   : 24972
Passed  : 16184 (64.81%)
Removed : 8788 (35.19%)

Unique genes       : 5626
Unique transcripts : 11026

Classifications, by isoform
-------------
Full splice match       : 7815 (48.29%)
Incomplete splice match : 4888 (30.20%)
Novel in catalog        : 1784 (11.02%)
Novel not in catalog    : 1565 (9.67%)
Antisense               : 8 (0.05%)
Genic intron            : 0 (0.00%)
Genic genomic           : 19 (0.12%)
Intergenic              : 13 (0.08%)
Other                   : 92 (0.57%)

Classifications, by read
-------------
Full splice match       : 197595 (35.07%)
Incomplete splice match : 130555 (23.17%)
Novel in catalog        : 22978 (4.08%)
Novel not in catalog    : 211639 (37.56%)
Antisense               : 19 (0.00%)
Genic intron            : 0 (0.00%)
Genic genomic           : 64 (0.01%)
Intergenic              : 26 (0.00%)
Other                   : 552 (0.10%)

Junctions
-----------
Known canonical     : 101447 (97.36%)
Known non-canonical : 16 (0.02%)
Novel canonical     : 2737 (2.63%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 5605 (99.63%)
Novel : 21 (0.37%)

Filter reasons
----------------
Intrapriming               : 3729 (42.43%)
Monoexonic                 : 0 (0.00%)
RT switching               : 366 (4.16%)
Low coverage/non-canonical : 4693 (53.40%)