Classifications
-------------
Input   : 9655
Passed  : 6461 (66.92%)
Removed : 3194 (33.08%)

Unique genes       : 3828
Unique transcripts : 5697

Classifications, by isoform
-------------
Full splice match       : 4329 (67.00%)
Incomplete splice match : 813 (12.58%)
Novel in catalog        : 639 (9.89%)
Novel not in catalog    : 626 (9.69%)
Antisense               : 3 (0.05%)
Genic intron            : 0 (0.00%)
Genic genomic           : 5 (0.08%)
Intergenic              : 2 (0.03%)
Other                   : 44 (0.68%)

Classifications, by read
-------------
Full splice match       : NA
Incomplete splice match : NA
Novel in catalog        : NA
Novel not in catalog    : NA
Antisense               : NA
Genic intron            : NA
Genic genomic           : NA
Intergenic              : NA
Other                   : NA

Junctions
-----------
Known canonical     : 40488 (97.31%)
Known non-canonical : 8 (0.02%)
Novel canonical     : 1110 (2.67%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 3823 (99.87%)
Novel : 5 (0.13%)

Filter reasons
----------------
Intrapriming               : 1887 (59.08%)
Monoexonic                 : 0 (0.00%)
RT switching               : 191 (5.98%)
Low coverage/non-canonical : 1116 (34.94%)