Classifications
-------------
Input   : 13991
Passed  : 9717 (69.45%)
Removed : 4274 (30.55%)

Unique genes       : 3958
Unique transcripts : 6824

Classifications, by isoform
-------------
Full splice match       : 5078 (52.26%)
Incomplete splice match : 2811 (28.93%)
Novel in catalog        : 948 (9.76%)
Novel not in catalog    : 814 (8.38%)
Antisense               : 3 (0.03%)
Genic intron            : 0 (0.00%)
Genic genomic           : 11 (0.11%)
Intergenic              : 5 (0.05%)
Other                   : 47 (0.48%)

Classifications, by read
-------------
Full splice match       : 100102 (35.11%)
Incomplete splice match : 64404 (22.59%)
Novel in catalog        : 10072 (3.53%)
Novel not in catalog    : 110258 (38.68%)
Antisense               : 7 (0.00%)
Genic intron            : 0 (0.00%)
Genic genomic           : 34 (0.01%)
Intergenic              : 11 (0.00%)
Other                   : 194 (0.07%)

Junctions
-----------
Known canonical     : 59256 (97.69%)
Known non-canonical : 8 (0.01%)
Novel canonical     : 1394 (2.30%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 3950 (99.80%)
Novel : 8 (0.20%)

Filter reasons
----------------
Intrapriming               : 1840 (43.05%)
Monoexonic                 : 0 (0.00%)
RT switching               : 205 (4.80%)
Low coverage/non-canonical : 2229 (52.15%)