Classifications
-------------
Input   : 44757
Passed  : 22281 (49.78%)
Removed : 22476 (50.22%)

Unique genes       : 8649
Unique transcripts : 19557

Classifications, by isoform
-------------
Full splice match       : 11164 (50.11%)
Incomplete splice match : 3320 (14.90%)
Novel in catalog        : 3214 (14.42%)
Novel not in catalog    : 4328 (19.42%)
Antisense               : 52 (0.23%)
Genic intron            : 0 (0.00%)
Genic genomic           : 25 (0.11%)
Intergenic              : 27 (0.12%)
Other                   : 151 (0.68%)

Classifications, by read
-------------
Full splice match       : NA
Incomplete splice match : NA
Novel in catalog        : NA
Novel not in catalog    : NA
Antisense               : NA
Genic intron            : NA
Genic genomic           : NA
Intergenic              : NA
Other                   : NA

Junctions
-----------
Known canonical     : 128109 (94.66%)
Known non-canonical : 22 (0.02%)
Novel canonical     : 7203 (5.32%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 8584 (99.25%)
Novel : 65 (0.75%)

Filter reasons
----------------
Intrapriming               : 12216 (54.35%)
Monoexonic                 : 0 (0.00%)
RT switching               : 1035 (4.60%)
Low coverage/non-canonical : 9225 (41.04%)