Classifications
-------------
Input   : 71630
Passed  : 38718 (54.05%)
Removed : 32912 (45.95%)

Unique genes       : 9139
Unique transcripts : 24755

Classifications, by isoform
-------------
Full splice match       : 15848 (40.93%)
Incomplete splice match : 12884 (33.28%)
Novel in catalog        : 4264 (11.01%)
Novel not in catalog    : 5368 (13.86%)
Antisense               : 67 (0.17%)
Genic intron            : 0 (0.00%)
Genic genomic           : 38 (0.10%)
Intergenic              : 59 (0.15%)
Other                   : 190 (0.49%)

Classifications, by read
-------------
Full splice match       : 2129817 (53.49%)
Incomplete splice match : 1143241 (28.71%)
Novel in catalog        : 98941 (2.48%)
Novel not in catalog    : 606884 (15.24%)
Antisense               : 251 (0.01%)
Genic intron            : 0 (0.00%)
Genic genomic           : 123 (0.00%)
Intergenic              : 120 (0.00%)
Other                   : 2385 (0.06%)

Junctions
-----------
Known canonical     : 207028 (95.91%)
Known non-canonical : 23 (0.01%)
Novel canonical     : 8799 (4.08%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 9036 (98.87%)
Novel : 103 (1.13%)

Filter reasons
----------------
Intrapriming               : 11850 (36.01%)
Monoexonic                 : 0 (0.00%)
RT switching               : 1092 (3.32%)
Low coverage/non-canonical : 19970 (60.68%)