Classifications
-------------
Input   : 1507988
Passed  : 602026 (39.92%)
Removed : 905962 (60.08%)

Unique genes       : 26678
Unique transcripts : 337149

Classifications, by isoform
-------------
Full splice match       : 126989 (21.09%)
Incomplete splice match : 193577 (32.15%)
Novel in catalog        : 139902 (23.24%)
Novel not in catalog    : 125902 (20.91%)
Antisense               : 2050 (0.34%)
Genic intron            : 0 (0.00%)
Genic genomic           : 2190 (0.36%)
Intergenic              : 7394 (1.23%)
Other                   : 4022 (0.67%)

Classifications, by read
-------------
Full splice match       : 19842958 (77.98%)
Incomplete splice match : 3093779 (12.16%)
Novel in catalog        : 1412211 (5.55%)
Novel not in catalog    : 1027395 (4.04%)
Antisense               : 8995 (0.04%)
Genic intron            : 0 (0.00%)
Genic genomic           : 16878 (0.07%)
Intergenic              : 23005 (0.09%)
Other                   : 19441 (0.08%)

Junctions
-----------
Known canonical     : 4677517 (95.23%)
Known non-canonical : 302 (0.01%)
Novel canonical     : 233801 (4.76%)
Novel non-canonical : 0 (0.00%)

Genes
-------
Known : 18230 (68.33%)
Novel : 8448 (31.67%)

Filter reasons
----------------
Intrapriming               : 497693 (54.94%)
Monoexonic                 : 0 (0.00%)
RT switching               : 17447 (1.93%)
Low coverage/non-canonical : 390822 (43.14%)