2020-09-23 08:11:40,201 - Cogent - INFO - Setting k-mer size to: 30
2020-09-23 08:11:40,201 - Cogent - INFO - Setting expected error rate to: 1%
2020-09-23 08:11:40,201 - Cogent - INFO - Trim input lower bases=TRUE.
2020-09-23 08:11:40,329 - Cogent.splice_cycle - INFO - K-mer in-seq cycle detection: None found at k=30
2020-09-23 08:11:43,542 - Cogent - INFO - Initial Graph Size: 12 nodes, 13 edges
2020-09-23 08:11:43,580 - Cogent - INFO - Post-Reduction Graph Size: 3 nodes, 2 edges
2020-09-23 08:11:43,581 - Cogent.process_path - INFO - number of paths now: 1
2020-09-23 08:11:43,581 - Cogent.process_path - INFO - number of paths now: 2
2020-09-23 08:11:43,794 - Cogent - INFO - [RUNTIME] for graph construction and reduction: 3.3221497535705566
2020-09-23 08:11:43,794 - Cogent - INFO - [RUNTIME] for path finding and LP solving: 0.0714559555053711
2020-09-23 08:11:43,794 - Cogent - INFO - [RUNTIME] for GMAP and post-processing: 0.1420590877532959
2020-09-23 08:11:43,794 - Cogent - INFO - [RUNTIME] Total time in run_Cogent: 3.5356647968292236