2020-09-23 08:11:21,651 - Cogent - INFO - Setting k-mer size to: 30
2020-09-23 08:11:21,652 - Cogent - INFO - Setting expected error rate to: 1%
2020-09-23 08:11:21,652 - Cogent - INFO - Trim input lower bases=TRUE.
2020-09-23 08:11:21,741 - Cogent.splice_cycle - INFO - K-mer in-seq cycle detection: None found at k=30
2020-09-23 08:11:23,562 - Cogent - INFO - Initial Graph Size: 23 nodes, 28 edges
2020-09-23 08:11:23,621 - Cogent - INFO - Post-Reduction Graph Size: 15 nodes, 18 edges
2020-09-23 08:11:23,621 - Cogent.process_path - INFO - number of paths now: 7
2020-09-23 08:11:23,825 - Cogent - INFO - [RUNTIME] for graph construction and reduction: 1.939323902130127
2020-09-23 08:11:23,825 - Cogent - INFO - [RUNTIME] for path finding and LP solving: 0.07209229469299316
2020-09-23 08:11:23,825 - Cogent - INFO - [RUNTIME] for GMAP and post-processing: 0.1316828727722168
2020-09-23 08:11:23,825 - Cogent - INFO - [RUNTIME] Total time in run_Cogent: 2.143099069595337