Index of /public/dataset/HG002/Sequel-201810

Icon  Name                                  Last modified      Size  Description
[PARENTDIR] Parent Directory - [   ] GRCh38.HG002.bam 2018-10-01 04:08 13G [   ] GRCh38.HG002.bam.bai 2018-10-01 04:09 7.6M [TXT] GRCh38.HG002_pbsv.vcf 2018-10-01 09:11 13M [TXT] README.txt 2018-10-01 09:38 504 [TXT] URLs.txt 2018-10-01 09:41 2.2K [   ] m54026_180925_081656.subreads.bam 2018-09-25 15:15 17G [   ] m54026_180925_081656.subreads.bam.pbi 2018-09-25 15:15 9.5M [TXT] m54026_180925_081656.subreadset.xml 2018-09-30 22:11 3.3K [   ] m54026_180926_145535.subreads.bam 2018-09-26 21:48 18G [   ] m54026_180926_145535.subreads.bam.pbi 2018-09-26 21:48 9.4M [TXT] m54026_180926_145535.subreadset.xml 2018-09-30 22:11 3.3K [   ] m54043_180926_165101.subreads.bam 2018-09-27 00:11 18G [   ] m54043_180926_165101.subreads.bam.pbi 2018-09-27 00:11 9.9M [TXT] m54043_180926_165101.subreadset.xml 2018-09-30 22:11 3.3K
SAMPLE
    HG002 extracted DNA

METHODS
    Shearing         15 kb with g-TUBE
    Library prep     SMRTbell Express
    Size selection   >15 kb with BluePippin
    Sequencing       Sequel System with binding kit 3.0 (101-500-400) and chemistry 3.0 (101-427-800)
    Run time         10 hrs per SMRT Cell
    Reference        GCA_000001405.15_GRCh38_no_alt_analysis_set
    Variant Calling  Structural Variant Calling analysis in SMRT Link 6.0

DOWNLOAD
    URLs and md5 checksums are listed in URLs.txt