{
    "_comment": "Created by pbcopper v26.1.0",
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        },
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        },
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        },
        {
            "id": "ccs_processing.mean_qv_q30",
            "name": ">=Q30 Read Quality (mean)",
            "value": 38
        },
        {
            "id": "ccs_processing.base_count_q30",
            "name": "Base quality >=Q30 (bp)",
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        {
            "id": "ccs_processing.base_percentage_q30",
            "name": "Base quality >=Q30 (%)",
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    ],
    "dataset_uuids": [
        "3bd380ef-b6bc-4bc7-87c9-819f8c0fc430"
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    "id": "ccs_processing",
    "plotGroups": [],
    "tables": [],
    "title": "CCS Processing Report",
    "uuid": "bbe4ba2b-46e6-433a-98a3-729f019f0f07",
    "version": "1.0.1"
}
